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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015822672.1_cds_XP_016501236.1_14988
CDS Infomation

[gene=LOC107819620] [db_xref=GeneID:107819620] [protein=long chain acyl-CoA synthetase 2-like] [protein_id=XP_016501236.1] [location=join(27758..27903,28400..28463,28772..28865,28981..29033,29196..29244,29370..29446,29718..29757,29836..29930,30030..30194,30635..30745,30861..30948,31075..31141,31242..31317,31392..31509,31974..32219,32598..32737,33074..33256,33330..33449,33833..33880)] [gbkey=CDS]
Sequence

ATGGAAAGTTATACGGTGAAAGTTGAAGAAAGTCGACCAGCCGTTGATGGAAAGCCATCT
GCAGGGCCAGTTTATAGGTGCATTTACGCTAAAGATGGTCTCATGGAAATGCCTGTTAGT
TTTGAGTCACCTTGGGATTTCTTCAGTGAATCGGTTAAGAAGAATCCCAAAAATCAAATG
CTGGGACGCCGTCAGGTTGTTGACAACAAGGCAGGTTCCTACAACTGGTTAACATATGAG
GACGTTTACAAAACCACAATCAAAATTGGTTCAGCCATCCGAAGCCGTGGTGTCAATCCG
ATGAACAAATGTGGCATCTATGGTGTGAACTCTCCTGAGTGGATAATGGCTATGGAGGCT
TGTAACAGCCAAGGAATTTCATATGTACCACTCTATGATTCTCTTGGTGCAAATGCAGTG
GAATTTATCATAAACCATGCTGAAGTTTCAATAGCTTTTGCCCAAGAAAGCAAAATACCG
GCTATCTTATCATGCTTGTCAAAGTGCAGTTCTTACCTAAAAACCGTCGTCAGCTTTGGA
AACATTTCCAGCACGCAGAAAAGTGAAGCAGAGGAACAAGGAGTAGCTTGCTTCTCATGG
GATGAGTTTGTTCAAATGGGAAGTTTGGATCATGAACTTCCTCAGAAACGGAAGACTGAT
ATATGTACAATTATGTACACAAGCGGAACTACTGGAGAACCAAAAGGCGTCATTTTGACT
AATGGGGCTTTCATGGGAGAAGTTCTATCGATGGATCAACTTCTCGCTGAAACAGACGAA
GAGGGAACAGGAGATGACGTGTACTTTTCGTTCCTTCCACTGGCTCATATATTTGATCAA
ATAGTTGAGACATATTGCATATACAGGGGTGCTTCAATAGGATTTTGGCAAGGCGACATT
AGATACTTGATTGAGGATCTTCTGGTATTGAAGCCCACTATATTTTGTGGAGTTCCAAGA
GTTTTTGACAGGATATACACAGGTGTGATGGATAAAATTGAAGCTGGAGGTTTGTTAAAG
AAGCTGCTTTTCCAATATGCATATAACTACAAGTTAAGGAATATGGAGAAAGGACTAAGA
CAAGATGAAGCAGCTCCTCGCTTTGACAGGCTGGTTTTTGACAAGATCAAACTAGCATTT
GGTGGACGAGTTCGTCTCATGCTTTCTGGAGCTGCTCCTTTGCCCAAGCATGTCGAAGAA
TTTCTAAGGGTGACATGCTGCTGTTCTTTAGCTCAAGGATATGGTCTTACTGAAAGTTGT
GGAGGATGTTTCACATCCATAGCCAATGTTCACCCCATGATAGGAACTGTTGGTGTTCCA
ATGACTACAATAGAGGCAAGACTTGAGTCCGTGCCAGAAATGGGATATGATGCGCTCGCA
AGTGTGCCATGCGGAGAAATTTGTCTGAGGGGAAAAACCTTGTTTTCGGGGTACCATAAG
CGAGAAGATCTTACAAAAGCAGTACTTGTGGATGGATGGTTTCATACAGGTGACATTGGT
GAGTGGCAGCCAGATGGAGCAATGAAAATCATTGACCGGAAAAAGAACATATTTAAGCTG
TCTCAAGGGGAGTATGTGGCTGTGGAAAGCATTGAAGGGTTATACTCCAGATGCCCACTT
ATTACATCGATCTGGGTATATGGAAATAGTTTCGAGTCCTTTTTAGTGGCCGTGGTAGTT
CCAGAAAGAAAAGCACTTGAAGACTGGGCTTCAAGTAATCAAGAAACTGGAGATTTTTCA
GCTCTATGCAATAACTCAAAGTCAAGGAAGTACATTTTGGATGAACTCAACAGCACTGCC
AAGAAACACCAACTTCGAGGTTTTGAAATGTTACGTGCAGTCCATTTGGAGCCAAAACCT
TTTGACATTGAGCGAGATTTAGTTACTCCCACATTCAAACTGAAAAGGCCACAGCTGCTC
AACTATTACAAGGACATTATCGATCAGCTGTACAAAGAAGGTAATGCAAAAACTGCATAG

Peptide Sequence

PEP ID

XP_016501236.1
PEP Infomation

PREDICTED: long chain acyl-CoA synthetase 2-like [Nicotiana tabacum]
Sequence

MESYTVKVEESRPAVDGKPSAGPVYRCIYAKDGLMEMPVSFESPWDFFSESVKKNPKNQM
LGRRQVVDNKAGSYNWLTYEDVYKTTIKIGSAIRSRGVNPMNKCGIYGVNSPEWIMAMEA
CNSQGISYVPLYDSLGANAVEFIINHAEVSIAFAQESKIPAILSCLSKCSSYLKTVVSFG
NISSTQKSEAEEQGVACFSWDEFVQMGSLDHELPQKRKTDICTIMYTSGTTGEPKGVILT
NGAFMGEVLSMDQLLAETDEEGTGDDVYFSFLPLAHIFDQIVETYCIYRGASIGFWQGDI
RYLIEDLLVLKPTIFCGVPRVFDRIYTGVMDKIEAGGLLKKLLFQYAYNYKLRNMEKGLR
QDEAAPRFDRLVFDKIKLAFGGRVRLMLSGAAPLPKHVEEFLRVTCCCSLAQGYGLTESC
GGCFTSIANVHPMIGTVGVPMTTIEARLESVPEMGYDALASVPCGEICLRGKTLFSGYHK
REDLTKAVLVDGWFHTGDIGEWQPDGAMKIIDRKKNIFKLSQGEYVAVESIEGLYSRCPL
ITSIWVYGNSFESFLVAVVVPERKALEDWASSNQETGDFSALCNNSKSRKYILDELNSTA
KKHQLRGFEMLRAVHLEPKPFDIERDLVTPTFKLKRPQLLNYYKDIIDQLYKEGNAKTA

Transcript Sequence

Gene sequence data has not been registered.